You are right about the issue posted above. The error for Notes has nothing to do with Email Reconciliation, just syncing between BB adn Outlook for Notes/Memopad.

Typically the Notes folder is the original but for some reason the folder id changes. Last I heard MS didn't know why this was happening. But it's the same thing if you deleted the Notes folder and created your own. When the Id changes the BES does not care as it is not the "Default" Notes folder created initially with the mailbox.

Either way, try running the outlook command to fix it, it's the simpliest solution.

MFCMAPI is good and bad at the same time. While it's great for fixing this issue, if used wrong the mailbox might be redered useless.

For email reconciliation just check the Email Reconciliation options on the BB itself. Make sure that Delete On is set to Mailbox and handheld and that Reconcile On is set to Yes.

If you are missing and of those then delete the desktop[CMIME] service book and resend it from the BES.